1 files changed, 0 insertions, 3 deletions
diff --git a/varscan2codon.pl b/varscan2codon.pl
index a7edad7..2c490b6 100755
--- a/varscan2codon.pl
+++ b/varscan2codon.pl
@@ -57,9 +57,6 @@ while (<$variants>) {
     $start -= $offset;
 
     my $codon = substr $genome, $start, 3;
-    my $check_aa = $aa2letter{$codon2aa{$codon}};
-
-    my $tmp = $codon;
     my $orig_aa = $aa2letter{$codon2aa{$codon}};
     substr $codon, $offset, 1, $new_nt;
     my $new_aa = $aa2letter{$codon2aa{$codon}};