From c7f2bd8f2c2da652baff5ebc35562f7567574c9e Mon Sep 17 00:00:00 2001
From: Brian Cully <bjc@kublai.com>
Date: Thu, 18 Feb 2021 16:34:51 -0500
Subject: Get genome cloning working again.

---
 codon.mjs  | 8 --------
 genome.mjs | 8 ++++----
 2 files changed, 4 insertions(+), 12 deletions(-)

diff --git a/codon.mjs b/codon.mjs
index 7cc5ea1..612e4ac 100644
--- a/codon.mjs
+++ b/codon.mjs
@@ -25,14 +25,6 @@ class Codon {
         return this._elt
     }
 
-    get aaElt() {
-        if (this._aaElt === undefined) {
-            this._aaElt = document.createElement('div')
-            this._aaElt.classList.add('amino-acid')
-        }
-        return this._aaElt
-    }
-
     lock() {
         this.bases.forEach(n => n.lock())
         this.aminoAcid.lock()
diff --git a/genome.mjs b/genome.mjs
index c90d10a..ed69dbf 100644
--- a/genome.mjs
+++ b/genome.mjs
@@ -9,14 +9,14 @@ class Genome {
         }
     }
 
-    constructor(nucleotideGenerator) {
+    constructor(nucleotides) {
         const codonList = document.createElement('ol')
         this._boundNucleotideClickedHandler =
             this.nucleotideClickedHandler.bind(this)
 
         this.codons = []
         let tmpCodon = []
-        nucleotideGenerator.forEach(base => {
+        nucleotides.forEach(base => {
             tmpCodon.push(base)
             if (tmpCodon.length == 3) {
                 const c = new Codon(...tmpCodon)
@@ -55,11 +55,11 @@ class Genome {
 
     unlock() {
         this.elt.classList.remove('locked')
-        this.coons.forEach(n => n.unlock())
+        this.codons.forEach(n => n.unlock())
     }
 
     clone() {
-        return new Genome(this.codons.map(c => c.value))
+        return new Genome(this.codons.flatMap(c => c.bases.map(b => b.value)))
     }
 
     get selectedNucleotide() {
-- 
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