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| author | Brian Cully <bjc@kublai.com> | 2022-07-07 21:17:40 -0400 |
|---|---|---|
| committer | Brian Cully <bjc@kublai.com> | 2022-07-07 21:17:40 -0400 |
| commit | 79d5aa9716881932c225c911d775797f4a21f7f7 (patch) | |
| tree | ccf2c4f3c63f8bf67a41f7e8ea594c35d14f7dda | |
| parent | 122e63a1af0b6b637443bd6cfde1a984a948bc97 (diff) | |
| download | fav-79d5aa9716881932c225c911d775797f4a21f7f7.tar.gz fav-79d5aa9716881932c225c911d775797f4a21f7f7.zip | |
Remove unused variables.
| -rwxr-xr-x | varscan2codon.pl | 3 |
1 files changed, 0 insertions, 3 deletions
diff --git a/varscan2codon.pl b/varscan2codon.pl index a7edad7..2c490b6 100755 --- a/varscan2codon.pl +++ b/varscan2codon.pl @@ -57,9 +57,6 @@ while (<$variants>) { $start -= $offset; my $codon = substr $genome, $start, 3; - my $check_aa = $aa2letter{$codon2aa{$codon}}; - - my $tmp = $codon; my $orig_aa = $aa2letter{$codon2aa{$codon}}; substr $codon, $offset, 1, $new_nt; my $new_aa = $aa2letter{$codon2aa{$codon}}; |