| Commit message (Collapse) | Author | Age | Files | Lines | |
|---|---|---|---|---|---|
| * | don't bail on nucleotide check errors | Brian Cully | 2024-01-19 | 1 | -1/+1 |
| | | | | | print an error message and keep going | ||||
| * | remove dead code | Brian Cully | 2024-01-19 | 1 | -1/+0 |
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| * | crash out early if codon lookup fails | Brian Cully | 2022-12-12 | 1 | -0/+2 |
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| * | strip newlines in input before codon lookup | Brian Cully | 2022-12-12 | 1 | -0/+1 |
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| * | put ref genome and protein ranges back | Brian Cully | 2022-09-12 | 2 | -0/+15 |
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| * | ignore work directories | Brian Cully | 2022-09-12 | 3 | -15/+1 |
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| * | Calculate codon starts from the start of the protein they're in. | Brian Cully | 2022-07-08 | 1 | -14/+18 |
| | | | | | | Turns out that the start of the genome ain't necessarily the start of a coding region. | ||||
| * | Remove unused variables. | Brian Cully | 2022-07-07 | 1 | -3/+0 |
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| * | Update notes with latest emails and babel for translating. | Brian Cully | 2022-07-07 | 1 | -4/+181 |
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| * | Add script for converting nucleotide variance to aa variance. | Brian Cully | 2022-07-07 | 1 | -0/+107 |
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| * | Fix up P3 to finish at STOP codon. | Brian Cully | 2022-07-07 | 1 | -1/+1 |
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| * | Add script for printing a protein's codon sequence. | Brian Cully | 2022-07-01 | 1 | -0/+70 |
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| * | Add codon to amino acid short code CSV file. | Brian Cully | 2022-07-01 | 1 | -0/+65 |
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| * | Add CSV for mapping amino acid short codes to letters. | Brian Cully | 2022-07-01 | 1 | -0/+22 |
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| * | Add header to sample start-stop sequences. | Brian Cully | 2022-07-01 | 1 | -1/+1 |
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| * | Add worknotes and files from Siobain's email. | Brian Cully | 2022-07-01 | 4 | -0/+55 |
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index : fav.git | |
| functional annotation for varscan |
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