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* ignore todo and to-send directoriesBrian Cully2024-01-201-1/+3
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* javascript: embed license infoBrian Cully2024-01-201-1/+29
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* javascript: import translation tables only where neededBrian Cully2024-01-201-4/+4
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* add AGPLv3 licenseBrian Cully2024-01-201-0/+661
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* move static files to site directoryBrian Cully2024-01-1913-5/+5
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* manifest.scm: add emacsBrian Cully2024-01-191-0/+1
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* add faviconsBrian Cully2024-01-198-0/+7
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* add javascript versionBrian Cully2024-01-195-0/+581
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* notes: remove old emailsBrian Cully2024-01-191-146/+16
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* fix error message when opening variants fileBrian Cully2024-01-191-1/+1
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* don't bail on nucleotide check errorsBrian Cully2024-01-191-1/+1
| | | | print an error message and keep going
* remove dead codeBrian Cully2024-01-191-1/+0
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* crash out early if codon lookup failsBrian Cully2022-12-121-0/+2
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* strip newlines in input before codon lookupBrian Cully2022-12-121-0/+1
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* put ref genome and protein ranges backBrian Cully2022-09-122-0/+15
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* ignore work directoriesBrian Cully2022-09-123-15/+1
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* Calculate codon starts from the start of the protein they're in.Brian Cully2022-07-081-14/+18
| | | | | Turns out that the start of the genome ain't necessarily the start of a coding region.
* Remove unused variables.Brian Cully2022-07-071-3/+0
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* Update notes with latest emails and babel for translating.Brian Cully2022-07-071-4/+181
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* Add script for converting nucleotide variance to aa variance.Brian Cully2022-07-071-0/+107
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* Fix up P3 to finish at STOP codon.Brian Cully2022-07-071-1/+1
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* Add script for printing a protein's codon sequence.Brian Cully2022-07-011-0/+70
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* Add codon to amino acid short code CSV file.Brian Cully2022-07-011-0/+65
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* Add CSV for mapping amino acid short codes to letters.Brian Cully2022-07-011-0/+22
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* Add header to sample start-stop sequences.Brian Cully2022-07-011-1/+1
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* Add worknotes and files from Siobain's email.Brian Cully2022-07-014-0/+55