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| author | Brian Cully <bjc@kublai.com> | 2021-02-17 21:40:03 -0500 |
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| committer | Brian Cully <bjc@kublai.com> | 2021-02-17 21:40:28 -0500 |
| commit | 4bb133a3515fa54be34b8ec50b80d6dcbe3a0b3d (patch) | |
| tree | 35c929036f31e9e1c641ea1b007432aedf373166 /amino-acid.mjs | |
| download | molsim2-4bb133a3515fa54be34b8ec50b80d6dcbe3a0b3d.tar.gz molsim2-4bb133a3515fa54be34b8ec50b80d6dcbe3a0b3d.zip | |
Initial commit.
Diffstat (limited to 'amino-acid.mjs')
| -rw-r--r-- | amino-acid.mjs | 76 |
1 files changed, 76 insertions, 0 deletions
diff --git a/amino-acid.mjs b/amino-acid.mjs new file mode 100644 index 0000000..7df50d4 --- /dev/null +++ b/amino-acid.mjs @@ -0,0 +1,76 @@ +class AminoAcid { + // Create a protein from three nucleotides. + constructor(n1, n2, n3) { + this.codon = n1+n2+n3 + this.value = AminoAcid.codonMap[this.codon] + } +} + +AminoAcid.codonMap = { + 'TAA': 'STOP', + 'TGA': 'STOP', + 'TAG': 'STOP', + 'GTT': 'Val', + 'GTC': 'Val', + 'GTA': 'Val', + 'GTG': 'Val', + 'TAT': 'Tyr', + 'TAC': 'Tyr', + 'TGG': 'Trp', + 'ACT': 'Thr', + 'ACC': 'Thr', + 'ACA': 'Thr', + 'ACG': 'Thr', + 'TCT': 'Ser', + 'TCC': 'Ser', + 'TCA': 'Ser', + 'TCG': 'Ser', + 'AGT': 'Ser', + 'AGC': 'Ser', + 'CCT': 'Pro', + 'CCC': 'Pro', + 'CCA': 'Pro', + 'CCG': 'Pro', + 'TTT': 'Phe', + 'TTC': 'Phe', + 'ATG': 'Met', + 'AAA': 'Lys', + 'AAG': 'Lys', + 'CTT': 'Leu', + 'CTC': 'Leu', + 'CTA': 'Leu', + 'CTG': 'Leu', + 'TTA': 'Leu', + 'TTG': 'Leu', + 'ATT': 'Ile', + 'ATC': 'Ile', + 'ATA': 'Ile', + 'CAT': 'His', + 'CAC': 'His', + 'GGT': 'Gly', + 'GGC': 'Gly', + 'GGA': 'Gly', + 'GGG': 'Gly', + 'GAA': 'Glu', + 'GAG': 'Glu', + 'CAA': 'Gln', + 'CAG': 'Gln', + 'TGT': 'Cys', + 'TGC': 'Cys', + 'GAT': 'Asp', + 'GAC': 'Asp', + 'AAT': 'Asn', + 'AAC': 'Asn', + 'CGT': 'Arg', + 'CGC': 'Arg', + 'CGA': 'Arg', + 'CGG': 'Arg', + 'AGA': 'Arg', + 'AGG': 'Arg', + 'GCT': 'Ala', + 'GCC': 'Ala', + 'GCA': 'Ala', + 'GCG': 'Ala', +} + +export default AminoAcid |